Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 AP005901.3-202ENST00000581653 237 ntBASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 AL031008.1-201ENST00000619963 541 ntBASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRIT1Q9P2V4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 SDHAP2-201ENST00000455183 2001 ntBASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 AC113404.2-201ENST00000507884 177 ntBASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 AL353801.3-201ENST00000609898 542 ntBASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRIT1Q9P2V4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 KRT16P4-201ENST00000453883 522 ntBASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 AL160237.2-201ENST00000556165 472 ntBASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 AP000974.1-201ENST00000623909 2387 ntBASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRIT1Q9P2V4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 AL499627.1-201ENST00000569373 2188 ntBASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 NUS1P2-201ENST00000417358 873 ntBASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 AC079781.3-201ENST00000449110 356 ntBASIC17.65■□□□□ 0.42
LRIT1Q9P2V4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms