Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AP005242.2-201ENST00000580065 1175 ntBASIC17.09■□□□□ 0.33
RLIMQ9NVW2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.09■□□□□ 0.33
RLIMQ9NVW2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RLIMQ9NVW2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RLIMQ9NVW2 AC138028.4-201ENST00000564984 1845 ntBASIC17.08■□□□□ 0.33
RLIMQ9NVW2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 AL390955.1-201ENST00000428694 934 ntBASIC17.08■□□□□ 0.32
RLIMQ9NVW2 SNORA78-201ENST00000459373 127 ntBASIC17.08■□□□□ 0.32
RLIMQ9NVW2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 MIR4785-201ENST00000585005 73 ntBASIC17.08■□□□□ 0.32
RLIMQ9NVW2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 AP000525.1-201ENST00000608286 694 ntBASIC17.08■□□□□ 0.32
RLIMQ9NVW2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.08■□□□□ 0.32
RLIMQ9NVW2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 GNAS-203ENST00000306120 1878 ntBASIC17.07■□□□□ 0.32
RLIMQ9NVW2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RLIMQ9NVW2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 KRT18P41-201ENST00000518924 1277 ntBASIC17.06■□□□□ 0.32
RLIMQ9NVW2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 AL023803.3-201ENST00000615559 522 ntBASIC17.06■□□□□ 0.32
RLIMQ9NVW2 AP006294.2-201ENST00000641667 209 ntBASIC17.06■□□□□ 0.32
RLIMQ9NVW2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
RLIMQ9NVW2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms