Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 GMCL1P1-201ENST00000463439 1581 ntBASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
UPF3BQ9BZI7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 CYP2D8P-201ENST00000433633 1490 ntBASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 KRT18P23-201ENST00000435622 1283 ntBASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 AC138932.1-201ENST00000534164 6830 ntBASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
UPF3BQ9BZI7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 HOXB1-202ENST00000577092 1414 ntBASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 WWOX-216ENST00000569818 525 ntBASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.84■■□□□ 1.09
UPF3BQ9BZI7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 CCR12P-201ENST00000446203 998 ntBASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
UPF3BQ9BZI7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
UPF3BQ9BZI7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
UPF3BQ9BZI7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms