Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AP000593.1-201ENST00000393668 712 ntBASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AC246785.2-201ENST00000432512 513 ntBASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 KRT18P23-201ENST00000435622 1283 ntBASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 DRAXINP1-201ENST00000437611 948 ntBASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 FAAHP1-202ENST00000446499 1238 ntBASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 TPSP2-201ENST00000561760 610 ntBASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.23■■□□□ 1.15
RPAP1Q9BWH6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 AC004870.1-201ENST00000315132 882 ntBASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 NUS1P1-201ENST00000446295 882 ntBASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RPAP1Q9BWH6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 AC010240.3-201ENST00000607688 395 ntBASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
RPAP1Q9BWH6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.2■■□□□ 1.15
RPAP1Q9BWH6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
RPAP1Q9BWH6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
RPAP1Q9BWH6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
RPAP1Q9BWH6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms