Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 METTL21AP1-201ENST00000438852 635 ntBASIC15.49■□□□□ 0.07
SPG11Q96JI7 AP006288.1-201ENST00000446065 395 ntBASIC15.49■□□□□ 0.07
SPG11Q96JI7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 AL356309.3-201ENST00000624132 1934 ntBASIC15.49■□□□□ 0.07
SPG11Q96JI7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 MCCD1P2-201ENST00000423228 335 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 AC113404.2-201ENST00000507884 177 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 UNC93B6-202ENST00000528242 690 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 MTDHP5-201ENST00000598980 586 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 GABARAPL3-202ENST00000624044 1851 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 AC112482.1-201ENST00000492080 688 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 AC092364.2-202ENST00000597012 1073 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 Z83851.2-201ENST00000609564 659 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 Z98044.1-201ENST00000632503 1764 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPG11Q96JI7 INTS4P1-201ENST00000438455 1935 ntBASIC15.48■□□□□ 0.07
SPG11Q96JI7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SPG11Q96JI7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 AL163051.1-201ENST00000569214 1512 ntBASIC15.47■□□□□ 0.07
SPG11Q96JI7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.47■□□□□ 0.07
SPG11Q96JI7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.47■□□□□ 0.07
SPG11Q96JI7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SPG11Q96JI7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 RFPL4AP1-201ENST00000530883 850 ntBASIC15.46■□□□□ 0.07
SPG11Q96JI7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 AC025062.2-201ENST00000605477 670 ntBASIC15.46■□□□□ 0.07
SPG11Q96JI7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPG11Q96JI7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SPG11Q96JI7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.46■□□□□ 0.07
SPG11Q96JI7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms