Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM5Q96HC4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 SLC25A3P1-201ENST00000443844 931 ntBASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 AC097493.4-201ENST00000641197 219 ntBASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM5Q96HC4 AC018470.1-201ENST00000624790 3129 ntBASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 DUTP2-201ENST00000519164 463 ntBASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 AL031432.5-201ENST00000641059 760 ntBASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDLIM5Q96HC4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.86■□□□□ 0.45
PDLIM5Q96HC4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms