Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.5
CKAP2Q8WWK9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CKAP2Q8WWK9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AP000593.1-201ENST00000393668 712 ntBASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AC090192.1-201ENST00000517740 490 ntBASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AC060766.5-201ENST00000590539 871 ntBASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AC008687.6-201ENST00000596318 630 ntBASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 AC018695.7-201ENST00000624587 2492 ntBASIC18.2■□□□□ 0.5
CKAP2Q8WWK9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CKAP2Q8WWK9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CKAP2Q8WWK9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 AL138688.1-201ENST00000624851 1594 ntBASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.17■□□□□ 0.5
CKAP2Q8WWK9 AL355312.1-201ENST00000407115 2176 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms