Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 AP001412.1-201ENST00000608405 714 ntBASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 KRT8P45-201ENST00000414328 1447 ntBASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL55Q7Z7F7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 FAM197Y1-201ENST00000421178 764 ntBASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 AC011506.1-201ENST00000474329 610 ntBASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 CD177P1-201ENST00000606252 935 ntBASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 AP000692.2-201ENST00000608391 879 ntBASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 DGCR10-201ENST00000609839 495 ntBASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC11.81□□□□□ -0.52
MRPL55Q7Z7F7 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL55Q7Z7F7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms