Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIST2H2BCQ6DN03 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIST2H2BCQ6DN03 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.62■□□□□ 0.09
HIST2H2BCQ6DN03 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.62■□□□□ 0.09
HIST2H2BCQ6DN03 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HIST2H2BCQ6DN03 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIST2H2BCQ6DN03 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HIST2H2BCQ6DN03 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 PMS2P4-201ENST00000412466 1052 ntBASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 FAM58CP-201ENST00000435741 640 ntBASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 MTCL1P1-201ENST00000446207 792 ntBASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 AC136632.2-201ENST00000512891 861 ntBASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.61■□□□□ 0.09
HIST2H2BCQ6DN03 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 AC002472.2-201ENST00000442739 958 ntBASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 INGX-202ENST00000489074 768 ntBASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 AP000344.2-201ENST00000512987 629 ntBASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 AC087641.1-201ENST00000557561 1021 ntBASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HIST2H2BCQ6DN03 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 KRT8P32-201ENST00000512863 1461 ntBASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 OR8S1-201ENST00000310194 1080 ntBASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 HCG4B-203ENST00000450128 991 ntBASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 AP005018.1-201ENST00000525475 301 ntBASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 RN7SL204P-201ENST00000582831 262 ntBASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HIST2H2BCQ6DN03 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms