Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.79■■□□□ 1.08
CREB3L3Q68CJ9 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 AC068880.1-201ENST00000507289 2297 ntBASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 AC008764.6-201ENST00000595909 2069 ntBASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.78■■□□□ 1.08
CREB3L3Q68CJ9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 AC005521.1-201ENST00000393351 872 ntBASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 AL137013.1-201ENST00000432946 1228 ntBASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 ATP5G1P1-201ENST00000448724 379 ntBASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 AL441883.1-201ENST00000566170 1045 ntBASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.77■■□□□ 1.08
CREB3L3Q68CJ9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CREB3L3Q68CJ9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CREB3L3Q68CJ9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
CREB3L3Q68CJ9 AC093010.1-201ENST00000473625 1624 ntBASIC21.77■■□□□ 1.07
CREB3L3Q68CJ9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 COX11P1-201ENST00000489116 835 ntBASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CREB3L3Q68CJ9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.75■■□□□ 1.07
CREB3L3Q68CJ9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms