Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 UPF3AP3-201ENST00000420996 769 ntBASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 LINC01711-201ENST00000598340 967 ntBASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.27□□□□□ -0.44
VPS13DQ5THJ4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 AC132938.6-201ENST00000623828 1655 ntBASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 RPS2P28-201ENST00000314255 741 ntBASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 KRT18P2-201ENST00000447938 1258 ntBASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 LINC01126-201ENST00000623515 1646 ntBASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 AC007967.3-201ENST00000434308 558 ntBASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 AC093909.1-201ENST00000504731 1122 ntBASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.27□□□□□ -0.45
VPS13DQ5THJ4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 PMPCAP1-201ENST00000508114 1576 ntBASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 CNN2P11-201ENST00000429351 262 ntBASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AC107918.4-202ENST00000641623 219 ntBASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13DQ5THJ4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 LAGE3P1-201ENST00000425356 484 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC007967.2-201ENST00000432613 625 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 ABCD1P5-201ENST00000445663 754 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC092910.1-201ENST00000482027 1129 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC023274.1-201ENST00000418278 595 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC092865.6-201ENST00000642101 219 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC079776.2-201ENST00000641154 1609 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AC005082.1-201ENST00000413042 2259 ntBASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.25□□□□□ -0.45
VPS13DQ5THJ4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms