Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC097374.2-201ENST00000618617 1306 ntBASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 AC125437.2-201ENST00000625180 2167 ntBASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 ELK2BP-201ENST00000415014 1224 ntBASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 MKNK2P1-201ENST00000437526 628 ntBASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 AC244107.1-201ENST00000442033 332 ntBASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 AC018845.2-201ENST00000568326 409 ntBASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 PGM5P2-202ENST00000637225 1043 ntBASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 AL022326.1-202ENST00000641533 845 ntBASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
SNAPC4Q5SXM2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC29.78■■■□□ 2.36
SNAPC4Q5SXM2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC29.77■■■□□ 2.36
SNAPC4Q5SXM2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
SNAPC4Q5SXM2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC29.76■■■□□ 2.35
SNAPC4Q5SXM2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC29.76■■■□□ 2.35
SNAPC4Q5SXM2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC29.76■■■□□ 2.35
SNAPC4Q5SXM2 AC141586.3-201ENST00000562166 1838 ntBASIC29.76■■■□□ 2.35
SNAPC4Q5SXM2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SNAPC4Q5SXM2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
SNAPC4Q5SXM2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
SNAPC4Q5SXM2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 CD82-202ENST00000342935 967 ntTSL 5 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 TSEN15P1-201ENST00000423257 515 ntBASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 AL096865.1-201ENST00000606796 927 ntBASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC29.74■■■□□ 2.35
SNAPC4Q5SXM2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 SDHAP2-201ENST00000455183 2001 ntBASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
SNAPC4Q5SXM2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms