Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC39AQ5SRH9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TTC39AQ5SRH9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.25■■□□□ 1.15
TTC39AQ5SRH9 GMCL1P1-201ENST00000463439 1581 ntBASIC22.25■■□□□ 1.15
TTC39AQ5SRH9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.25■■□□□ 1.15
TTC39AQ5SRH9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC22.25■■□□□ 1.15
TTC39AQ5SRH9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 AP002383.4-201ENST00000442518 975 ntBASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TTC39AQ5SRH9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 AP002414.4-201ENST00000589764 1148 ntBASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 KRT18P1-202ENST00000452408 1331 ntBASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TTC39AQ5SRH9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 KRT18P56-201ENST00000507275 550 ntBASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 IGHV3-41-201ENST00000613121 348 ntBASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC22.22■■□□□ 1.15
TTC39AQ5SRH9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 AC113404.2-201ENST00000507884 177 ntBASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 MIR3180-1-201ENST00000580374 94 ntBASIC22.21■■□□□ 1.15
TTC39AQ5SRH9 MIR3180-3-201ENST00000584616 94 ntBASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms