Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.82■□□□□ 0.12
LRRK2Q5S007 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 AP000867.4-201ENST00000641616 219 ntBASIC15.82■□□□□ 0.12
LRRK2Q5S007 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 AC073314.1-201ENST00000568729 2216 ntBASIC15.81■□□□□ 0.12
LRRK2Q5S007 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 MIR661-201ENST00000384842 89 ntBASIC15.81■□□□□ 0.12
LRRK2Q5S007 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRRK2Q5S007 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRRK2Q5S007 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 OR8S1-201ENST00000310194 1080 ntBASIC15.8■□□□□ 0.12
LRRK2Q5S007 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 CR383656.12-201ENST00000549567 513 ntBASIC15.8■□□□□ 0.12
LRRK2Q5S007 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LRRK2Q5S007 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.8■□□□□ 0.12
LRRK2Q5S007 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRK2Q5S007 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRK2Q5S007 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 AC022145.2-201ENST00000598203 171 ntBASIC15.79■□□□□ 0.12
LRRK2Q5S007 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRK2Q5S007 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRK2Q5S007 PMPCAP1-201ENST00000508114 1576 ntBASIC15.79■□□□□ 0.12
LRRK2Q5S007 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRK2Q5S007 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 CRB3P1-201ENST00000449338 276 ntBASIC15.79■□□□□ 0.12
LRRK2Q5S007 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LRRK2Q5S007 AC006504.4-201ENST00000592118 1568 ntBASIC15.79■□□□□ 0.12
LRRK2Q5S007 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LRRK2Q5S007 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
LRRK2Q5S007 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRRK2Q5S007 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
LRRK2Q5S007 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms