Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.42■□□□□ 0.7
DSC1Q08554 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.42■□□□□ 0.7
DSC1Q08554 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.42■□□□□ 0.7
DSC1Q08554 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 AC125634.1-201ENST00000438758 1403 ntBASIC19.42■□□□□ 0.7
DSC1Q08554 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DSC1Q08554 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.41■□□□□ 0.7
DSC1Q08554 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
DSC1Q08554 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.41■□□□□ 0.7
DSC1Q08554 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.41■□□□□ 0.7
DSC1Q08554 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 AC132008.2-207ENST00000454517 770 ntBASIC19.41■□□□□ 0.7
DSC1Q08554 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DSC1Q08554 AC009533.2-201ENST00000543664 586 ntBASIC19.41■□□□□ 0.7
DSC1Q08554 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
DSC1Q08554 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.41■□□□□ 0.7
DSC1Q08554 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DSC1Q08554 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.41■□□□□ 0.7
DSC1Q08554 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DSC1Q08554 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
DSC1Q08554 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.4■□□□□ 0.7
DSC1Q08554 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.4■□□□□ 0.7
DSC1Q08554 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.4■□□□□ 0.7
DSC1Q08554 RNA5SP419-201ENST00000515908 135 ntBASIC19.4■□□□□ 0.7
DSC1Q08554 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.4■□□□□ 0.7
DSC1Q08554 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.4■□□□□ 0.7
DSC1Q08554 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.4■□□□□ 0.7
DSC1Q08554 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
DSC1Q08554 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.4■□□□□ 0.7
DSC1Q08554 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
DSC1Q08554 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DSC1Q08554 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.4■□□□□ 0.7
DSC1Q08554 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.4■□□□□ 0.7
DSC1Q08554 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
DSC1Q08554 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DSC1Q08554 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DSC1Q08554 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
DSC1Q08554 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.39■□□□□ 0.7
DSC1Q08554 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DSC1Q08554 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.39■□□□□ 0.69
DSC1Q08554 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.39■□□□□ 0.69
DSC1Q08554 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.39■□□□□ 0.69
DSC1Q08554 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
DSC1Q08554 AC011467.2-201ENST00000598425 242 ntBASIC19.39■□□□□ 0.69
DSC1Q08554 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DSC1Q08554 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 INTS4P1-201ENST00000438455 1935 ntBASIC19.39■□□□□ 0.69
DSC1Q08554 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
DSC1Q08554 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
DSC1Q08554 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.39■□□□□ 0.69
DSC1Q08554 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.39■□□□□ 0.69
DSC1Q08554 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
DSC1Q08554 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
DSC1Q08554 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DSC1Q08554 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DSC1Q08554 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
DSC1Q08554 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
DSC1Q08554 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
DSC1Q08554 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DSC1Q08554 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.38■□□□□ 0.69
DSC1Q08554 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DSC1Q08554 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms