Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC004951.3-201ENST00000418645 1148 ntBASIC16.05■□□□□ 0.16
SEC61A1P61619 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.05■□□□□ 0.16
SEC61A1P61619 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.05■□□□□ 0.16
SEC61A1P61619 AC097488.1-201ENST00000507834 756 ntBASIC16.05■□□□□ 0.16
SEC61A1P61619 KRT18P21-201ENST00000515767 1272 ntBASIC16.05■□□□□ 0.16
SEC61A1P61619 AC130371.2-201ENST00000619443 611 ntBASIC16.05■□□□□ 0.16
SEC61A1P61619 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.05■□□□□ 0.16
SEC61A1P61619 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.05■□□□□ 0.16
SEC61A1P61619 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.05■□□□□ 0.16
SEC61A1P61619 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SEC61A1P61619 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.05■□□□□ 0.16
SEC61A1P61619 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.04■□□□□ 0.16
SEC61A1P61619 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.04■□□□□ 0.16
SEC61A1P61619 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.04■□□□□ 0.16
SEC61A1P61619 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.04■□□□□ 0.16
SEC61A1P61619 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.04■□□□□ 0.16
SEC61A1P61619 CRYGFP-201ENST00000418459 633 ntBASIC16.04■□□□□ 0.16
SEC61A1P61619 AC091390.4-202ENST00000476426 537 ntBASIC16.04■□□□□ 0.16
SEC61A1P61619 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.04■□□□□ 0.16
SEC61A1P61619 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.04■□□□□ 0.16
SEC61A1P61619 SLC25A1P4-201ENST00000567977 778 ntBASIC16.04■□□□□ 0.16
SEC61A1P61619 AC010947.1-201ENST00000623454 693 ntBASIC16.04■□□□□ 0.16
SEC61A1P61619 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.04■□□□□ 0.16
SEC61A1P61619 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.04■□□□□ 0.16
SEC61A1P61619 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SEC61A1P61619 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.03■□□□□ 0.16
SEC61A1P61619 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 PCDHA12-202ENST00000613593 2588 ntBASIC16.03■□□□□ 0.16
SEC61A1P61619 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 LINC00896-202ENST00000609602 2128 ntBASIC16.03■□□□□ 0.16
SEC61A1P61619 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SEC61A1P61619 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.03■□□□□ 0.16
SEC61A1P61619 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.03■□□□□ 0.16
SEC61A1P61619 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SEC61A1P61619 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.03■□□□□ 0.16
SEC61A1P61619 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.03■□□□□ 0.16
SEC61A1P61619 NAPSB-206ENST00000562112 1266 ntBASIC16.03■□□□□ 0.16
SEC61A1P61619 DGCR10-201ENST00000609839 495 ntBASIC16.03■□□□□ 0.16
SEC61A1P61619 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SEC61A1P61619 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SEC61A1P61619 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 IRX1P1-201ENST00000438849 1838 ntBASIC16.03■□□□□ 0.16
SEC61A1P61619 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61A1P61619 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SEC61A1P61619 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.02■□□□□ 0.16
SEC61A1P61619 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.02■□□□□ 0.16
SEC61A1P61619 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.02■□□□□ 0.16
SEC61A1P61619 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.02■□□□□ 0.16
SEC61A1P61619 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms