Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.59■□□□□ 0.89
LBX1P52954 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LBX1P52954 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LBX1P52954 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.59■□□□□ 0.89
LBX1P52954 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LBX1P52954 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LBX1P52954 MIR943-201ENST00000401286 94 ntBASIC20.59■□□□□ 0.89
LBX1P52954 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.59■□□□□ 0.89
LBX1P52954 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.59■□□□□ 0.89
LBX1P52954 IGHV3-65-201ENST00000523210 341 ntBASIC20.59■□□□□ 0.89
LBX1P52954 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.59■□□□□ 0.89
LBX1P52954 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LBX1P52954 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.59■□□□□ 0.89
LBX1P52954 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.59■□□□□ 0.89
LBX1P52954 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LBX1P52954 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.59■□□□□ 0.89
LBX1P52954 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.59■□□□□ 0.89
LBX1P52954 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.59■□□□□ 0.89
LBX1P52954 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.58■□□□□ 0.89
LBX1P52954 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.58■□□□□ 0.89
LBX1P52954 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.58■□□□□ 0.89
LBX1P52954 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LBX1P52954 AL596325.1-201ENST00000563991 1082 ntBASIC20.58■□□□□ 0.89
LBX1P52954 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.58■□□□□ 0.89
LBX1P52954 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LBX1P52954 AC008687.5-201ENST00000593746 558 ntBASIC20.58■□□□□ 0.89
LBX1P52954 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.58■□□□□ 0.89
LBX1P52954 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LBX1P52954 KRT8P50-201ENST00000562022 1438 ntBASIC20.58■□□□□ 0.88
LBX1P52954 AC025580.3-201ENST00000617932 1424 ntBASIC20.58■□□□□ 0.88
LBX1P52954 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LBX1P52954 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LBX1P52954 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LBX1P52954 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
LBX1P52954 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LBX1P52954 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LBX1P52954 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.57■□□□□ 0.88
LBX1P52954 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.57■□□□□ 0.88
LBX1P52954 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
LBX1P52954 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.57■□□□□ 0.88
LBX1P52954 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.57■□□□□ 0.88
LBX1P52954 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.57■□□□□ 0.88
LBX1P52954 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.57■□□□□ 0.88
LBX1P52954 AC096734.2-201ENST00000562054 433 ntBASIC20.57■□□□□ 0.88
LBX1P52954 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.57■□□□□ 0.88
LBX1P52954 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LBX1P52954 AC004706.3-202ENST00000621574 984 ntBASIC20.57■□□□□ 0.88
LBX1P52954 AC073592.4-201ENST00000623827 446 ntBASIC20.57■□□□□ 0.88
LBX1P52954 AC025048.6-201ENST00000634326 1161 ntBASIC20.57■□□□□ 0.88
LBX1P52954 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.57■□□□□ 0.88
LBX1P52954 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LBX1P52954 AL121761.2-201ENST00000598007 1648 ntBASIC20.56■□□□□ 0.88
LBX1P52954 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.56■□□□□ 0.88
LBX1P52954 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LBX1P52954 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
LBX1P52954 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.56■□□□□ 0.88
LBX1P52954 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 AC008667.4-201ENST00000607370 168 ntBASIC20.56■□□□□ 0.88
LBX1P52954 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LBX1P52954 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LBX1P52954 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LBX1P52954 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LBX1P52954 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LBX1P52954 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms