Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.13■□□□□ 0.65
MTHFRP42898 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MTHFRP42898 FAM215A-202ENST00000632077 792 ntBASIC19.13■□□□□ 0.65
MTHFRP42898 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.13■□□□□ 0.65
MTHFRP42898 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MTHFRP42898 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
MTHFRP42898 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MTHFRP42898 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.12■□□□□ 0.65
MTHFRP42898 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.12■□□□□ 0.65
MTHFRP42898 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.12■□□□□ 0.65
MTHFRP42898 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 IRX1P1-201ENST00000438849 1838 ntBASIC19.12■□□□□ 0.65
MTHFRP42898 Z98044.1-201ENST00000632503 1764 ntBASIC19.12■□□□□ 0.65
MTHFRP42898 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
MTHFRP42898 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.12■□□□□ 0.65
MTHFRP42898 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MTHFRP42898 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.12■□□□□ 0.65
MTHFRP42898 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.12■□□□□ 0.65
MTHFRP42898 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.12■□□□□ 0.65
MTHFRP42898 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MTHFRP42898 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MTHFRP42898 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
MTHFRP42898 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.12■□□□□ 0.65
MTHFRP42898 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
MTHFRP42898 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.12■□□□□ 0.65
MTHFRP42898 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.12■□□□□ 0.65
MTHFRP42898 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.11■□□□□ 0.65
MTHFRP42898 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.11■□□□□ 0.65
MTHFRP42898 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MTHFRP42898 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 KRT8P50-201ENST00000562022 1438 ntBASIC19.11■□□□□ 0.65
MTHFRP42898 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
MTHFRP42898 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.11■□□□□ 0.65
MTHFRP42898 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
MTHFRP42898 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.11■□□□□ 0.65
MTHFRP42898 FGFR3P6-201ENST00000457012 610 ntBASIC19.11■□□□□ 0.65
MTHFRP42898 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.11■□□□□ 0.65
MTHFRP42898 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.11■□□□□ 0.65
MTHFRP42898 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.11■□□□□ 0.65
MTHFRP42898 AL049840.3-201ENST00000602669 611 ntBASIC19.11■□□□□ 0.65
MTHFRP42898 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
MTHFRP42898 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
MTHFRP42898 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
MTHFRP42898 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MTHFRP42898 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
MTHFRP42898 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MTHFRP42898 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.1■□□□□ 0.65
MTHFRP42898 FP475955.4-201ENST00000623131 1990 ntBASIC19.1■□□□□ 0.65
MTHFRP42898 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
MTHFRP42898 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.1■□□□□ 0.65
MTHFRP42898 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.1■□□□□ 0.65
MTHFRP42898 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.1■□□□□ 0.65
MTHFRP42898 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MTHFRP42898 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 RCN1P2-201ENST00000398357 915 ntBASIC19.1■□□□□ 0.65
MTHFRP42898 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.1■□□□□ 0.65
MTHFRP42898 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.1■□□□□ 0.65
MTHFRP42898 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.1■□□□□ 0.65
MTHFRP42898 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.1■□□□□ 0.65
MTHFRP42898 MTDHP3-201ENST00000594186 672 ntBASIC19.1■□□□□ 0.65
MTHFRP42898 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MTHFRP42898 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms