Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RFC3P40938 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC3P40938 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC3P40938 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC3P40938 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.76■□□□□ 0.27
RFC3P40938 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC3P40938 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC3P40938 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RFC3P40938 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC3P40938 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC3P40938 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.76■□□□□ 0.27
RFC3P40938 PRELID1P1-202ENST00000567272 903 ntBASIC16.76■□□□□ 0.27
RFC3P40938 MIR3652-201ENST00000579335 131 ntBASIC16.76■□□□□ 0.27
RFC3P40938 AC005332.3-201ENST00000589904 676 ntBASIC16.76■□□□□ 0.27
RFC3P40938 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
RFC3P40938 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.76■□□□□ 0.27
RFC3P40938 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
RFC3P40938 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
RFC3P40938 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.76■□□□□ 0.27
RFC3P40938 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
RFC3P40938 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFC3P40938 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.75■□□□□ 0.27
RFC3P40938 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.75■□□□□ 0.27
RFC3P40938 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.75■□□□□ 0.27
RFC3P40938 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.75■□□□□ 0.27
RFC3P40938 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.75■□□□□ 0.27
RFC3P40938 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.75■□□□□ 0.27
RFC3P40938 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RFC3P40938 CHCHD2P8-201ENST00000429873 447 ntBASIC16.75■□□□□ 0.27
RFC3P40938 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.75■□□□□ 0.27
RFC3P40938 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.75■□□□□ 0.27
RFC3P40938 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.75■□□□□ 0.27
RFC3P40938 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RFC3P40938 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.75■□□□□ 0.27
RFC3P40938 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
RFC3P40938 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 AC083906.6-201ENST00000641366 219 ntBASIC16.75■□□□□ 0.27
RFC3P40938 AL499627.1-201ENST00000569373 2188 ntBASIC16.75■□□□□ 0.27
RFC3P40938 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RFC3P40938 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RFC3P40938 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RFC3P40938 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RFC3P40938 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RFC3P40938 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RFC3P40938 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.74■□□□□ 0.27
RFC3P40938 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.74■□□□□ 0.27
RFC3P40938 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.74■□□□□ 0.27
RFC3P40938 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RFC3P40938 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.74■□□□□ 0.27
RFC3P40938 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RFC3P40938 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RFC3P40938 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms