Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.65■□□□□ 0.9
HOXC6P09630 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HOXC6P09630 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC6P09630 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC6P09630 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HOXC6P09630 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.65■□□□□ 0.9
HOXC6P09630 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXC6P09630 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXC6P09630 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.64■□□□□ 0.9
HOXC6P09630 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXC6P09630 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
HOXC6P09630 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HOXC6P09630 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HOXC6P09630 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HOXC6P09630 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 IGHV3-22-201ENST00000520721 359 ntBASIC20.64■□□□□ 0.89
HOXC6P09630 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXC6P09630 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.64■□□□□ 0.89
HOXC6P09630 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.64■□□□□ 0.89
HOXC6P09630 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXC6P09630 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.64■□□□□ 0.89
HOXC6P09630 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.64■□□□□ 0.89
HOXC6P09630 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HOXC6P09630 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.64■□□□□ 0.89
HOXC6P09630 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HOXC6P09630 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC6P09630 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HOXC6P09630 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXC6P09630 AC125634.1-201ENST00000438758 1403 ntBASIC20.63■□□□□ 0.89
HOXC6P09630 AP005117.1-201ENST00000584346 1413 ntBASIC20.63■□□□□ 0.89
HOXC6P09630 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 AL024508.2-201ENST00000607749 1894 ntBASIC20.63■□□□□ 0.89
HOXC6P09630 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC6P09630 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC6P09630 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC6P09630 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXC6P09630 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC6P09630 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC6P09630 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.63■□□□□ 0.89
HOXC6P09630 MTCL1P1-201ENST00000446207 792 ntBASIC20.63■□□□□ 0.89
HOXC6P09630 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXC6P09630 PGAM5P1-201ENST00000518923 814 ntBASIC20.63■□□□□ 0.89
HOXC6P09630 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC6P09630 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 AC083906.6-201ENST00000641366 219 ntBASIC20.63■□□□□ 0.89
HOXC6P09630 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXC6P09630 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HOXC6P09630 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.63■□□□□ 0.89
HOXC6P09630 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.63■□□□□ 0.89
HOXC6P09630 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXC6P09630 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXC6P09630 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HOXC6P09630 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HOXC6P09630 SDHAP2-201ENST00000455183 2001 ntBASIC20.62■□□□□ 0.89
HOXC6P09630 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.62■□□□□ 0.89
HOXC6P09630 AC021087.4-201ENST00000563761 564 ntBASIC20.62■□□□□ 0.89
HOXC6P09630 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.62■□□□□ 0.89
HOXC6P09630 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXC6P09630 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
HOXC6P09630 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXC6P09630 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
HOXC6P09630 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXC6P09630 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HOXC6P09630 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.62■□□□□ 0.89
HOXC6P09630 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXC6P09630 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.62■□□□□ 0.89
HOXC6P09630 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
HOXC6P09630 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HOXC6P09630 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms