Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSDP07339 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSDP07339 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSDP07339 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CTSDP07339 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSDP07339 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.23■□□□□ 0.03
CTSDP07339 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.23■□□□□ 0.03
CTSDP07339 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CTSDP07339 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.23■□□□□ 0.03
CTSDP07339 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 AL023806.1-201ENST00000603994 1649 ntBASIC15.23■□□□□ 0.03
CTSDP07339 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.23■□□□□ 0.03
CTSDP07339 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTSDP07339 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CTSDP07339 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSDP07339 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSDP07339 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSDP07339 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.22■□□□□ 0.03
CTSDP07339 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.22■□□□□ 0.03
CTSDP07339 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CTSDP07339 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.22■□□□□ 0.03
CTSDP07339 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSDP07339 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.22■□□□□ 0.03
CTSDP07339 AL445675.2-201ENST00000620291 557 ntBASIC15.22■□□□□ 0.03
CTSDP07339 AC131212.4-201ENST00000623606 975 ntBASIC15.22■□□□□ 0.03
CTSDP07339 PP12613-201ENST00000424958 2230 ntBASIC15.22■□□□□ 0.03
CTSDP07339 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.22■□□□□ 0.03
CTSDP07339 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.22■□□□□ 0.03
CTSDP07339 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CTSDP07339 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CTSDP07339 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTSDP07339 AD000864.1-201ENST00000624076 2295 ntBASIC15.22■□□□□ 0.03
CTSDP07339 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CTSDP07339 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CTSDP07339 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CTSDP07339 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.21■□□□□ 0.03
CTSDP07339 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CTSDP07339 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSDP07339 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
CTSDP07339 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.21■□□□□ 0.03
CTSDP07339 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.21■□□□□ 0.03
CTSDP07339 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.21■□□□□ 0.03
CTSDP07339 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.21■□□□□ 0.03
CTSDP07339 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CTSDP07339 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CTSDP07339 KRT18P55-202ENST00000578578 1546 ntBASIC15.21■□□□□ 0.03
CTSDP07339 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CTSDP07339 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTSDP07339 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CTSDP07339 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.2■□□□□ 0.02
CTSDP07339 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CTSDP07339 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CTSDP07339 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CTSDP07339 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms