Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.33■□□□□ 0.68
LSM8O95777 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.33■□□□□ 0.68
LSM8O95777 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.33■□□□□ 0.68
LSM8O95777 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LSM8O95777 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.33■□□□□ 0.68
LSM8O95777 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM8O95777 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.32■□□□□ 0.68
LSM8O95777 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM8O95777 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.32■□□□□ 0.68
LSM8O95777 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LSM8O95777 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LSM8O95777 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.32■□□□□ 0.68
LSM8O95777 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LSM8O95777 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LSM8O95777 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
LSM8O95777 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.31■□□□□ 0.68
LSM8O95777 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LSM8O95777 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.31■□□□□ 0.68
LSM8O95777 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 AC005521.1-201ENST00000393351 872 ntBASIC19.31■□□□□ 0.68
LSM8O95777 SLC25A6P5-201ENST00000435663 894 ntBASIC19.31■□□□□ 0.68
LSM8O95777 RASA4DP-201ENST00000460726 1199 ntBASIC19.31■□□□□ 0.68
LSM8O95777 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.31■□□□□ 0.68
LSM8O95777 AL441883.1-201ENST00000566170 1045 ntBASIC19.31■□□□□ 0.68
LSM8O95777 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
LSM8O95777 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LSM8O95777 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LSM8O95777 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.3■□□□□ 0.68
LSM8O95777 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.3■□□□□ 0.68
LSM8O95777 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LSM8O95777 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.3■□□□□ 0.68
LSM8O95777 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.3■□□□□ 0.68
LSM8O95777 YBX1P2-201ENST00000489612 999 ntBASIC19.3■□□□□ 0.68
LSM8O95777 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.3■□□□□ 0.68
LSM8O95777 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
LSM8O95777 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.3■□□□□ 0.68
LSM8O95777 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.3■□□□□ 0.68
LSM8O95777 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.3■□□□□ 0.68
LSM8O95777 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LSM8O95777 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LSM8O95777 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LSM8O95777 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LSM8O95777 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM8O95777 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 NOC2LP2-201ENST00000407594 1944 ntBASIC19.29■□□□□ 0.68
LSM8O95777 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM8O95777 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
LSM8O95777 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.29■□□□□ 0.68
LSM8O95777 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LSM8O95777 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
LSM8O95777 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.29■□□□□ 0.68
LSM8O95777 AC139887.4-201ENST00000607877 719 ntBASIC19.29■□□□□ 0.68
LSM8O95777 AC011558.1-201ENST00000623459 338 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms