Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AL355877.3-201ENST00000622820 899 ntBASIC28.43■■■□□ 2.14
PCF11O94913 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCF11O94913 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCF11O94913 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCF11O94913 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
PCF11O94913 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCF11O94913 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCF11O94913 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCF11O94913 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCF11O94913 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PCF11O94913 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCF11O94913 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCF11O94913 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCF11O94913 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PCF11O94913 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCF11O94913 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC28.42■■■□□ 2.14
PCF11O94913 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC28.42■■■□□ 2.14
PCF11O94913 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC28.42■■■□□ 2.14
PCF11O94913 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC28.42■■■□□ 2.14
PCF11O94913 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC28.42■■■□□ 2.14
PCF11O94913 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCF11O94913 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
PCF11O94913 AL049840.3-201ENST00000602669 611 ntBASIC28.42■■■□□ 2.14
PCF11O94913 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC28.42■■■□□ 2.14
PCF11O94913 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC28.42■■■□□ 2.14
PCF11O94913 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC28.42■■■□□ 2.14
PCF11O94913 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC28.42■■■□□ 2.14
PCF11O94913 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC28.42■■■□□ 2.14
PCF11O94913 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC28.42■■■□□ 2.14
PCF11O94913 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PCF11O94913 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC28.41■■■□□ 2.14
PCF11O94913 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC28.41■■■□□ 2.14
PCF11O94913 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC28.41■■■□□ 2.14
PCF11O94913 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC28.41■■■□□ 2.14
PCF11O94913 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC28.41■■■□□ 2.14
PCF11O94913 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
PCF11O94913 ABBA01031661.1-201ENST00000634362 1253 ntBASIC28.41■■■□□ 2.14
PCF11O94913 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 AC126763.1-201ENST00000552015 2118 ntBASIC28.41■■■□□ 2.14
PCF11O94913 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC28.41■■■□□ 2.14
PCF11O94913 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
PCF11O94913 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC28.41■■■□□ 2.14
PCF11O94913 AL591684.3-201ENST00000605187 298 ntBASIC28.41■■■□□ 2.14
PCF11O94913 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
PCF11O94913 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
PCF11O94913 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCF11O94913 CROCCP3-202ENST00000420820 1947 ntBASIC28.4■■■□□ 2.14
PCF11O94913 ESPNP-201ENST00000270691 2015 ntBASIC28.4■■■□□ 2.14
PCF11O94913 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC28.4■■■□□ 2.14
PCF11O94913 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC28.4■■■□□ 2.14
PCF11O94913 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC28.4■■■□□ 2.14
PCF11O94913 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
PCF11O94913 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
PCF11O94913 AC093010.1-201ENST00000473625 1624 ntBASIC28.4■■■□□ 2.14
PCF11O94913 MED22-202ENST00000371999 987 ntTSL 3 BASIC28.4■■■□□ 2.14
PCF11O94913 RBM17P3-201ENST00000417687 1192 ntBASIC28.4■■■□□ 2.14
PCF11O94913 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC28.4■■■□□ 2.14
PCF11O94913 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
PCF11O94913 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC28.4■■■□□ 2.14
PCF11O94913 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
PCF11O94913 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC28.39■■■□□ 2.14
PCF11O94913 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCF11O94913 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC28.39■■■□□ 2.14
PCF11O94913 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC28.39■■■□□ 2.14
PCF11O94913 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
PCF11O94913 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCF11O94913 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCF11O94913 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PCF11O94913 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCF11O94913 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PCF11O94913 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC28.39■■■□□ 2.14
PCF11O94913 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC28.39■■■□□ 2.14
PCF11O94913 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.39■■■□□ 2.14
PCF11O94913 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
PCF11O94913 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC28.39■■■□□ 2.13
PCF11O94913 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
PCF11O94913 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PCF11O94913 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC28.38■■■□□ 2.13
PCF11O94913 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
PCF11O94913 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC28.38■■■□□ 2.13
PCF11O94913 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms