Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST1O76090 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BEST1O76090 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BEST1O76090 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
BEST1O76090 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.19■□□□□ 0.66
BEST1O76090 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
BEST1O76090 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BEST1O76090 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.19■□□□□ 0.66
BEST1O76090 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.19■□□□□ 0.66
BEST1O76090 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.19■□□□□ 0.66
BEST1O76090 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.19■□□□□ 0.66
BEST1O76090 AC092119.3-201ENST00000612618 583 ntBASIC19.19■□□□□ 0.66
BEST1O76090 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BEST1O76090 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
BEST1O76090 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 PHGDH-209ENST00000641074 1780 ntBASIC19.19■□□□□ 0.66
BEST1O76090 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
BEST1O76090 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 AC135776.1-201ENST00000319817 2481 ntBASIC19.18■□□□□ 0.66
BEST1O76090 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BEST1O76090 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BEST1O76090 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 AC090164.3-201ENST00000610780 2143 ntBASIC19.18■□□□□ 0.66
BEST1O76090 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BEST1O76090 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BEST1O76090 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 CHCHD2P8-201ENST00000429873 447 ntBASIC19.18■□□□□ 0.66
BEST1O76090 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.18■□□□□ 0.66
BEST1O76090 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.18■□□□□ 0.66
BEST1O76090 AC113404.2-201ENST00000507884 177 ntBASIC19.18■□□□□ 0.66
BEST1O76090 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.18■□□□□ 0.66
BEST1O76090 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BEST1O76090 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BEST1O76090 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BEST1O76090 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 LINC00602-201ENST00000629776 2065 ntBASIC19.18■□□□□ 0.66
BEST1O76090 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BEST1O76090 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BEST1O76090 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.17■□□□□ 0.66
BEST1O76090 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
BEST1O76090 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BEST1O76090 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
BEST1O76090 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.17■□□□□ 0.66
BEST1O76090 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.17■□□□□ 0.66
BEST1O76090 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.17■□□□□ 0.66
BEST1O76090 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.17■□□□□ 0.66
BEST1O76090 AP002414.4-201ENST00000589764 1148 ntBASIC19.17■□□□□ 0.66
BEST1O76090 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
BEST1O76090 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.17■□□□□ 0.66
BEST1O76090 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.17■□□□□ 0.66
BEST1O76090 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BEST1O76090 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BEST1O76090 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.16■□□□□ 0.66
BEST1O76090 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.16■□□□□ 0.66
BEST1O76090 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms