Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC25.35■■□□□ 1.65
CHD2O14647 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHD2O14647 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CHD2O14647 CNN2P11-201ENST00000429351 262 ntBASIC25.35■■□□□ 1.65
CHD2O14647 MKNK2P1-201ENST00000437526 628 ntBASIC25.35■■□□□ 1.65
CHD2O14647 SRP19-202ENST00000445150 833 ntTSL 2 BASIC25.35■■□□□ 1.65
CHD2O14647 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC25.35■■□□□ 1.65
CHD2O14647 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD2O14647 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD2O14647 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC25.34■■□□□ 1.65
CHD2O14647 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD2O14647 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC25.34■■□□□ 1.65
CHD2O14647 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CHD2O14647 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
CHD2O14647 FAM8A3P-201ENST00000427218 844 ntBASIC25.34■■□□□ 1.65
CHD2O14647 AL645939.2-201ENST00000427340 991 ntBASIC25.34■■□□□ 1.65
CHD2O14647 AC108073.2-201ENST00000464002 357 ntBASIC25.34■■□□□ 1.65
CHD2O14647 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC25.34■■□□□ 1.65
CHD2O14647 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC25.34■■□□□ 1.65
CHD2O14647 AC018845.2-201ENST00000568326 409 ntBASIC25.34■■□□□ 1.65
CHD2O14647 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
CHD2O14647 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.34■■□□□ 1.65
CHD2O14647 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CHD2O14647 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
CHD2O14647 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC25.33■■□□□ 1.65
CHD2O14647 MIR4469-201ENST00000583919 79 ntBASIC25.33■■□□□ 1.65
CHD2O14647 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
CHD2O14647 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.64
CHD2O14647 ELK2BP-201ENST00000415014 1224 ntBASIC25.33■■□□□ 1.64
CHD2O14647 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
CHD2O14647 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.64
CHD2O14647 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC25.33■■□□□ 1.64
CHD2O14647 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
CHD2O14647 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHD2O14647 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD2O14647 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 LINC01126-201ENST00000623515 1646 ntBASIC25.32■■□□□ 1.64
CHD2O14647 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD2O14647 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHD2O14647 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHD2O14647 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC25.32■■□□□ 1.64
CHD2O14647 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
CHD2O14647 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC25.32■■□□□ 1.64
CHD2O14647 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC25.31■■□□□ 1.64
CHD2O14647 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC25.31■■□□□ 1.64
CHD2O14647 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC25.31■■□□□ 1.64
CHD2O14647 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC25.31■■□□□ 1.64
CHD2O14647 AC011467.4-201ENST00000594891 528 ntBASIC25.31■■□□□ 1.64
CHD2O14647 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC25.31■■□□□ 1.64
CHD2O14647 ELL2P1-201ENST00000413990 1906 ntBASIC25.31■■□□□ 1.64
CHD2O14647 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.31■■□□□ 1.64
CHD2O14647 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC25.31■■□□□ 1.64
CHD2O14647 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD2O14647 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC25.31■■□□□ 1.64
CHD2O14647 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
CHD2O14647 ADK-206ENST00000541550 2222 ntTSL 2 BASIC25.31■■□□□ 1.64
CHD2O14647 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC25.3■■□□□ 1.64
CHD2O14647 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC25.3■■□□□ 1.64
CHD2O14647 RPL28-205ENST00000558131 444 ntTSL 5 BASIC25.3■■□□□ 1.64
CHD2O14647 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC25.3■■□□□ 1.64
CHD2O14647 C20orf181-201ENST00000623918 480 ntBASIC25.3■■□□□ 1.64
CHD2O14647 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD2O14647 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC25.3■■□□□ 1.64
CHD2O14647 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD2O14647 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHD2O14647 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC25.3■■□□□ 1.64
CHD2O14647 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
CHD2O14647 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
CHD2O14647 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC25.3■■□□□ 1.64
CHD2O14647 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC25.3■■□□□ 1.64
CHD2O14647 POLI-202ENST00000406285 2030 ntTSL 2 BASIC25.3■■□□□ 1.64
CHD2O14647 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CHD2O14647 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms