Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHD1O14646 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC29.5■■■□□ 2.31
CHD1O14646 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
CHD1O14646 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC29.5■■■□□ 2.31
CHD1O14646 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHD1O14646 MIR661-201ENST00000384842 89 ntBASIC29.5■■■□□ 2.31
CHD1O14646 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC29.5■■■□□ 2.31
CHD1O14646 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC29.5■■■□□ 2.31
CHD1O14646 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC29.5■■■□□ 2.31
CHD1O14646 AL513210.1-201ENST00000629608 234 ntBASIC29.5■■■□□ 2.31
CHD1O14646 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHD1O14646 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHD1O14646 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
CHD1O14646 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHD1O14646 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHD1O14646 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CHD1O14646 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC29.5■■■□□ 2.31
CHD1O14646 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC29.5■■■□□ 2.31
CHD1O14646 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CHD1O14646 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHD1O14646 AC006504.4-201ENST00000592118 1568 ntBASIC29.49■■■□□ 2.31
CHD1O14646 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHD1O14646 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC29.49■■■□□ 2.31
CHD1O14646 FAM58CP-201ENST00000435741 640 ntBASIC29.49■■■□□ 2.31
CHD1O14646 AC093214.1-201ENST00000511688 1107 ntBASIC29.49■■■□□ 2.31
CHD1O14646 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC29.49■■■□□ 2.31
CHD1O14646 RIN3-211ENST00000557762 517 ntTSL 3 BASIC29.49■■■□□ 2.31
CHD1O14646 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
CHD1O14646 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC29.49■■■□□ 2.31
CHD1O14646 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC29.49■■■□□ 2.31
CHD1O14646 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC29.49■■■□□ 2.31
CHD1O14646 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHD1O14646 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC29.49■■■□□ 2.31
CHD1O14646 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC29.49■■■□□ 2.31
CHD1O14646 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC29.49■■■□□ 2.31
CHD1O14646 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CHD1O14646 NFYC-AS1-201ENST00000606277 1687 ntBASIC29.49■■■□□ 2.31
CHD1O14646 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC29.49■■■□□ 2.31
CHD1O14646 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
CHD1O14646 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC29.48■■■□□ 2.31
CHD1O14646 YTHDF3-AS1-201ENST00000603538 718 ntBASIC29.48■■■□□ 2.31
CHD1O14646 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
CHD1O14646 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC29.48■■■□□ 2.31
CHD1O14646 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
CHD1O14646 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC29.48■■■□□ 2.31
CHD1O14646 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 AC004461.1-201ENST00000412461 403 ntBASIC29.48■■■□□ 2.31
CHD1O14646 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 LBX2-AS1-202ENST00000603175 2083 ntBASIC29.48■■■□□ 2.31
CHD1O14646 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CHD1O14646 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHD1O14646 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC29.47■■■□□ 2.31
CHD1O14646 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CHD1O14646 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
CHD1O14646 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC29.47■■■□□ 2.31
CHD1O14646 HLA-V-201ENST00000429037 534 ntBASIC29.47■■■□□ 2.31
CHD1O14646 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC29.47■■■□□ 2.31
CHD1O14646 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CHD1O14646 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC29.47■■■□□ 2.31
CHD1O14646 AQP6-203ENST00000551733 849 ntTSL 3 BASIC29.47■■■□□ 2.31
CHD1O14646 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC29.47■■■□□ 2.31
CHD1O14646 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CHD1O14646 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CHD1O14646 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC29.47■■■□□ 2.31
CHD1O14646 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHD1O14646 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC29.46■■■□□ 2.31
CHD1O14646 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHD1O14646 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
CHD1O14646 KRT19P2-202ENST00000557173 1012 ntBASIC29.46■■■□□ 2.31
CHD1O14646 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC29.46■■■□□ 2.31
CHD1O14646 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC29.46■■■□□ 2.31
CHD1O14646 AC091812.2-201ENST00000619081 385 ntBASIC29.46■■■□□ 2.31
CHD1O14646 AC009102.3-201ENST00000623118 1491 ntBASIC29.46■■■□□ 2.31
CHD1O14646 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CHD1O14646 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC29.46■■■□□ 2.31
CHD1O14646 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC29.46■■■□□ 2.31
CHD1O14646 AC004817.3-201ENST00000602957 2129 ntBASIC29.46■■■□□ 2.31
CHD1O14646 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC29.46■■■□□ 2.31
CHD1O14646 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC29.46■■■□□ 2.31
CHD1O14646 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
CHD1O14646 METTL26-205ENST00000397666 726 ntTSL 2 BASIC29.45■■■□□ 2.31
CHD1O14646 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHD1O14646 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHD1O14646 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHD1O14646 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
CHD1O14646 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC29.45■■■□□ 2.3
CHD1O14646 GABARAPL3-202ENST00000624044 1851 ntBASIC29.45■■■□□ 2.3
CHD1O14646 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CHD1O14646 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.3
CHD1O14646 AC112698.1-201ENST00000510299 916 ntBASIC29.45■■■□□ 2.3
CHD1O14646 POLD4-207ENST00000531239 584 ntTSL 2 BASIC29.45■■■□□ 2.3
CHD1O14646 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC29.45■■■□□ 2.3
CHD1O14646 CD63-210ENST00000550776 870 ntTSL 5 BASIC29.45■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms