Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 KRT18P57-201ENST00000443599 1254 ntBASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 MIR3180-5-201ENST00000583743 153 ntBASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 CR769767.2-201ENST00000622735 460 ntBASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 AL109659.2-201ENST00000606809 1674 ntBASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 AC138932.1-201ENST00000534164 6830 ntBASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 AC036111.1-201ENST00000533973 1582 ntBASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.19■□□□□ 0.34
PRAMEF25A6NGN4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRAMEF25A6NGN4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 RCN1P1-201ENST00000400413 996 ntBASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PRAMEF25A6NGN4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 AC134043.2-201ENST00000624206 2238 ntBASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 MYLKP1-201ENST00000509077 1580 ntBASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.16■□□□□ 0.34
PRAMEF25A6NGN4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms