Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 KRT17P3-201ENST00000420566 1262 ntBASIC19.85■□□□□ 0.77
CCDC66A2RUB6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 AP003097.1-201ENST00000530657 1135 ntBASIC19.85■□□□□ 0.77
CCDC66A2RUB6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 AD000864.1-201ENST00000624076 2295 ntBASIC19.85■□□□□ 0.77
CCDC66A2RUB6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC66A2RUB6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 AC069544.1-201ENST00000609399 999 ntBASIC19.84■□□□□ 0.77
CCDC66A2RUB6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC66A2RUB6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCDC66A2RUB6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC66A2RUB6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms