Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC099343.3-201ENST00000605834 2503 ntBASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
SHANK2Q9UPX8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 MOK-208ENST00000519058 917 ntTSL 2 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SHANK2Q9UPX8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 SCARNA2-201ENST00000458748 420 ntBASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 AC112698.1-201ENST00000510299 916 ntBASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC27.15■■□□□ 1.94
SHANK2Q9UPX8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 AC073648.2-201ENST00000510116 352 ntBASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 AL049840.3-201ENST00000602669 611 ntBASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 PAN3-AS1-201ENST00000563843 1351 ntBASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 AL031598.1-201ENST00000561511 1773 ntBASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SHANK2Q9UPX8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SHANK2Q9UPX8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC27.14■■□□□ 1.93
SHANK2Q9UPX8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SHANK2Q9UPX8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 AC132008.2-207ENST00000454517 770 ntBASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 HIST2H3DP1-201ENST00000401004 416 ntBASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 AL355385.1-201ENST00000606123 409 ntBASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 AL139288.1-201ENST00000623748 933 ntBASIC27.13■■□□□ 1.93
SHANK2Q9UPX8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SHANK2Q9UPX8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms