Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
ZC3H4Q9UPT8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 AC068472.1-201ENST00000474589 881 ntBASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 MIR4469-201ENST00000583919 79 ntBASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 PGM5P2-202ENST00000637225 1043 ntBASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZC3H4Q9UPT8 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 CNN2P11-201ENST00000429351 262 ntBASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.11■■□□□ 1.13
ZC3H4Q9UPT8 AL162377.1-201ENST00000618844 1793 ntBASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 AC125634.1-201ENST00000438758 1403 ntBASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
ZC3H4Q9UPT8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3H4Q9UPT8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3H4Q9UPT8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.09■■□□□ 1.13
ZC3H4Q9UPT8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3H4Q9UPT8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ZC3H4Q9UPT8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
ZC3H4Q9UPT8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.09■■□□□ 1.13
ZC3H4Q9UPT8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms