Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 KRT18P1-202ENST00000452408 1331 ntBASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC6Q9UBN7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 HOXB1-202ENST00000577092 1414 ntBASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 FEM1AP3-201ENST00000403722 1741 ntBASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 MIR564-202ENST00000385049 94 ntBASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 AC246785.2-201ENST00000432512 513 ntBASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC6Q9UBN7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 AL845331.1-201ENST00000424978 1190 ntBASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.7■□□□□ 0.9
HDAC6Q9UBN7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 KRT8P32-201ENST00000512863 1461 ntBASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 AC111152.3-201ENST00000569699 673 ntBASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 IRX1P1-201ENST00000438849 1838 ntBASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HDAC6Q9UBN7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HDAC6Q9UBN7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms