Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBP1Q9NZI7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 ECEL1P3-201ENST00000427961 737 ntBASIC18.69■□□□□ 0.58
UBP1Q9NZI7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 AC012306.2-201ENST00000609350 630 ntBASIC18.69■□□□□ 0.58
UBP1Q9NZI7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
UBP1Q9NZI7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 ABALON-201ENST00000629058 1903 ntBASIC18.68■□□□□ 0.58
UBP1Q9NZI7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 KRT8P7-201ENST00000533003 1432 ntBASIC18.68■□□□□ 0.58
UBP1Q9NZI7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.68■□□□□ 0.58
UBP1Q9NZI7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 AC104390.1-201ENST00000555663 520 ntBASIC18.68■□□□□ 0.58
UBP1Q9NZI7 AL512604.3-201ENST00000569583 964 ntBASIC18.68■□□□□ 0.58
UBP1Q9NZI7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 AC141257.4-201ENST00000634557 245 ntBASIC18.68■□□□□ 0.58
UBP1Q9NZI7 AC136944.6-201ENST00000634818 245 ntBASIC18.68■□□□□ 0.58
UBP1Q9NZI7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBP1Q9NZI7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 AC093677.2-201ENST00000600169 1863 ntBASIC18.67■□□□□ 0.58
UBP1Q9NZI7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.67■□□□□ 0.58
UBP1Q9NZI7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms