Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 AC068587.9-201ENST00000641814 219 ntBASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.21■□□□□ 0.83
SPTLC3Q9NUV7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 CICP6-201ENST00000457191 2729 ntBASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 AC112777.1-201ENST00000540175 1423 ntBASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 AC233263.1-201ENST00000578059 224 ntBASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPTLC3Q9NUV7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 Z85996.1-201ENST00000494644 937 ntBASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 AC004264.1-201ENST00000608354 794 ntBASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 KRT8P45-201ENST00000414328 1447 ntBASIC20.19■□□□□ 0.82
SPTLC3Q9NUV7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPTLC3Q9NUV7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms