Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 MIR149-201ENST00000384879 89 ntBASIC19.41■□□□□ 0.7
TLR9Q9NR96 RBM17P3-201ENST00000417687 1192 ntBASIC19.41■□□□□ 0.7
TLR9Q9NR96 RPL13AP23-201ENST00000480739 586 ntBASIC19.41■□□□□ 0.7
TLR9Q9NR96 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 AC005336.2-201ENST00000593183 939 ntBASIC19.41■□□□□ 0.7
TLR9Q9NR96 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 TERC-201ENST00000602385 541 ntBASIC19.41■□□□□ 0.7
TLR9Q9NR96 AL049840.3-201ENST00000602669 611 ntBASIC19.41■□□□□ 0.7
TLR9Q9NR96 LINC02084-201ENST00000606069 1096 ntBASIC19.41■□□□□ 0.7
TLR9Q9NR96 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TLR9Q9NR96 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TLR9Q9NR96 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 FGFR3P6-201ENST00000457012 610 ntBASIC19.4■□□□□ 0.7
TLR9Q9NR96 SCARNA2-201ENST00000458748 420 ntBASIC19.4■□□□□ 0.7
TLR9Q9NR96 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 FAM215A-202ENST00000632077 792 ntBASIC19.4■□□□□ 0.7
TLR9Q9NR96 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TLR9Q9NR96 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.4■□□□□ 0.7
TLR9Q9NR96 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TLR9Q9NR96 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TLR9Q9NR96 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
TLR9Q9NR96 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TLR9Q9NR96 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.39■□□□□ 0.69
TLR9Q9NR96 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.39■□□□□ 0.69
TLR9Q9NR96 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.39■□□□□ 0.69
TLR9Q9NR96 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 MTDHP3-201ENST00000594186 672 ntBASIC19.39■□□□□ 0.69
TLR9Q9NR96 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 ZNF259P1-201ENST00000407656 1365 ntBASIC19.39■□□□□ 0.69
TLR9Q9NR96 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TLR9Q9NR96 AC112777.1-201ENST00000540175 1423 ntBASIC19.39■□□□□ 0.69
TLR9Q9NR96 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TLR9Q9NR96 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TLR9Q9NR96 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 MIR940-201ENST00000401276 94 ntBASIC19.38■□□□□ 0.69
TLR9Q9NR96 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TLR9Q9NR96 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.38■□□□□ 0.69
TLR9Q9NR96 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms