Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.97■□□□□ 0.15
C12orf4Q9NQ89 BICD1-207ENST00000551848 1962 ntBASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 PRKY-204ENST00000533551 1019 ntBASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C12orf4Q9NQ89 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
C12orf4Q9NQ89 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
C12orf4Q9NQ89 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 AL138781.1-201ENST00000566567 1274 ntBASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C12orf4Q9NQ89 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C12orf4Q9NQ89 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
C12orf4Q9NQ89 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
C12orf4Q9NQ89 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms