Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 AC134043.2-201ENST00000624206 2238 ntBASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 MIR4651-201ENST00000582622 73 ntBASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 CD177P1-201ENST00000606252 935 ntBASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 AP001412.1-201ENST00000608405 714 ntBASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 ITM2C-210ENST00000620962 501 ntBASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 AC034236.2-201ENST00000606662 1610 ntBASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR2J3Q9H1A7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 AC138028.4-201ENST00000564984 1845 ntBASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 AL023284.2-201ENST00000405850 579 ntBASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 FAM201B-201ENST00000458407 597 ntBASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
POLR2J3Q9H1A7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 FAM197Y1-201ENST00000421178 764 ntBASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 NUDT16P1-203ENST00000513809 620 ntBASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 AC008622.2-201ENST00000617006 1229 ntBASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR2J3Q9H1A7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 MFAP1P1-201ENST00000442257 1255 ntBASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.96■□□□□ 0.31
POLR2J3Q9H1A7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms