Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 POM121L13P-201ENST00000422362 380 ntBASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 C8orf49-201ENST00000525043 1968 ntBASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFAF3Q9BU61 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 MIR718-201ENST00000390190 70 ntBASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 RPS2P4-201ENST00000476944 856 ntBASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFAF3Q9BU61 TCAF2P1-201ENST00000291129 2421 ntBASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NDUFAF3Q9BU61 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms