Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 GPAT2P1-201ENST00000444924 1672 ntBASIC17.26■□□□□ 0.35
TREX2Q9BQ50 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
TREX2Q9BQ50 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TREX2Q9BQ50 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 AL023284.2-201ENST00000405850 579 ntBASIC17.25■□□□□ 0.35
TREX2Q9BQ50 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TREX2Q9BQ50 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 MIR564-202ENST00000385049 94 ntBASIC17.24■□□□□ 0.35
TREX2Q9BQ50 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 LIN28AP1-201ENST00000429574 405 ntBASIC17.24■□□□□ 0.35
TREX2Q9BQ50 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 BX664615.1-201ENST00000443558 458 ntBASIC17.24■□□□□ 0.35
TREX2Q9BQ50 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 MCCD1P1-208ENST00000445732 328 ntBASIC17.24■□□□□ 0.35
TREX2Q9BQ50 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 AC063952.2-201ENST00000498792 1227 ntBASIC17.24■□□□□ 0.35
TREX2Q9BQ50 AC097488.1-201ENST00000507834 756 ntBASIC17.24■□□□□ 0.35
TREX2Q9BQ50 AC091076.1-201ENST00000610741 619 ntBASIC17.24■□□□□ 0.35
TREX2Q9BQ50 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 AC068880.1-201ENST00000507289 2297 ntBASIC17.24■□□□□ 0.35
TREX2Q9BQ50 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TREX2Q9BQ50 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 AC093677.2-201ENST00000600169 1863 ntBASIC17.23■□□□□ 0.35
TREX2Q9BQ50 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 AC022616.7-201ENST00000525383 220 ntBASIC17.23■□□□□ 0.35
TREX2Q9BQ50 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 FAM87A-204ENST00000613235 858 ntBASIC17.23■□□□□ 0.35
TREX2Q9BQ50 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TREX2Q9BQ50 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms