Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
IFT140Q96RY7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
IFT140Q96RY7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
IFT140Q96RY7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
IFT140Q96RY7 CEND1P1-201ENST00000451006 455 ntBASIC30.25■■■□□ 2.43
IFT140Q96RY7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
IFT140Q96RY7 AL031432.2-201ENST00000566714 459 ntBASIC30.25■■■□□ 2.43
IFT140Q96RY7 AL928711.1-201ENST00000570165 459 ntBASIC30.25■■■□□ 2.43
IFT140Q96RY7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
IFT140Q96RY7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
IFT140Q96RY7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
IFT140Q96RY7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
IFT140Q96RY7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
IFT140Q96RY7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
IFT140Q96RY7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
IFT140Q96RY7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC30.23■■■□□ 2.43
IFT140Q96RY7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
IFT140Q96RY7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
IFT140Q96RY7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC30.23■■■□□ 2.43
IFT140Q96RY7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
IFT140Q96RY7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
IFT140Q96RY7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
IFT140Q96RY7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
IFT140Q96RY7 STOM-202ENST00000347359 870 ntTSL 2 BASIC30.23■■■□□ 2.43
IFT140Q96RY7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
IFT140Q96RY7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC30.23■■■□□ 2.43
IFT140Q96RY7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
IFT140Q96RY7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC30.23■■■□□ 2.43
IFT140Q96RY7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC30.23■■■□□ 2.43
IFT140Q96RY7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC30.23■■■□□ 2.43
IFT140Q96RY7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
IFT140Q96RY7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
IFT140Q96RY7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC30.22■■■□□ 2.43
IFT140Q96RY7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
IFT140Q96RY7 CRYGEP-201ENST00000412192 528 ntBASIC30.22■■■□□ 2.43
IFT140Q96RY7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
IFT140Q96RY7 PRYP5-201ENST00000451909 266 ntBASIC30.22■■■□□ 2.43
IFT140Q96RY7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC30.22■■■□□ 2.43
IFT140Q96RY7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
IFT140Q96RY7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
IFT140Q96RY7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
IFT140Q96RY7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
IFT140Q96RY7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
IFT140Q96RY7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
IFT140Q96RY7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
IFT140Q96RY7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
IFT140Q96RY7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
IFT140Q96RY7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC30.21■■■□□ 2.43
IFT140Q96RY7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.43
IFT140Q96RY7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
IFT140Q96RY7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
IFT140Q96RY7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 AC007967.3-201ENST00000434308 558 ntBASIC30.2■■■□□ 2.43
IFT140Q96RY7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 PDPK2P-202ENST00000562415 1191 ntBASIC30.2■■■□□ 2.43
IFT140Q96RY7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
IFT140Q96RY7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
IFT140Q96RY7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
IFT140Q96RY7 SDHAP2-201ENST00000455183 2001 ntBASIC30.2■■■□□ 2.43
IFT140Q96RY7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
IFT140Q96RY7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
IFT140Q96RY7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC30.19■■■□□ 2.42
IFT140Q96RY7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
IFT140Q96RY7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC30.19■■■□□ 2.42
IFT140Q96RY7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC30.19■■■□□ 2.42
IFT140Q96RY7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC30.19■■■□□ 2.42
IFT140Q96RY7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC30.19■■■□□ 2.42
IFT140Q96RY7 AC112698.1-201ENST00000510299 916 ntBASIC30.19■■■□□ 2.42
IFT140Q96RY7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC30.19■■■□□ 2.42
IFT140Q96RY7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC30.19■■■□□ 2.42
IFT140Q96RY7 AC093512.1-201ENST00000617969 520 ntBASIC30.19■■■□□ 2.42
IFT140Q96RY7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
IFT140Q96RY7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms