Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 SIGLEC30P-201ENST00000455569 941 ntBASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 MIR3180-5-201ENST00000583743 153 ntBASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 AC027612.4-201ENST00000605371 583 ntBASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 MIR6752-201ENST00000618442 71 ntBASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNTNAP3BQ96NU0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 OR8S1-201ENST00000310194 1080 ntBASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 TSEN15P1-201ENST00000423257 515 ntBASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CNTNAP3BQ96NU0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 AL023284.2-201ENST00000405850 579 ntBASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 AC005498.2-205ENST00000593218 784 ntBASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 AC064836.3-201ENST00000607928 673 ntBASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 AC008735.5-201ENST00000623544 497 ntBASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 AC087289.5-201ENST00000586076 3175 ntBASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNTNAP3BQ96NU0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 RCN1P2-201ENST00000398357 915 ntBASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNTNAP3BQ96NU0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms