Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AP002414.3-201ENST00000589352 1468 ntBASIC17.92■□□□□ 0.46
CFAP54Q96N23 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 MIR661-201ENST00000384842 89 ntBASIC17.92■□□□□ 0.46
CFAP54Q96N23 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 AL356309.3-201ENST00000624132 1934 ntBASIC17.92■□□□□ 0.46
CFAP54Q96N23 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CFAP54Q96N23 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.92■□□□□ 0.46
CFAP54Q96N23 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP54Q96N23 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AC109322.1-201ENST00000524499 1264 ntBASIC17.91■□□□□ 0.46
CFAP54Q96N23 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AC008556.1-201ENST00000610908 2040 ntBASIC17.91■□□□□ 0.46
CFAP54Q96N23 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP54Q96N23 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP54Q96N23 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 PDPK2P-202ENST00000562415 1191 ntBASIC17.91■□□□□ 0.46
CFAP54Q96N23 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CFAP54Q96N23 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP54Q96N23 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP54Q96N23 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 KRT18P27-201ENST00000427733 1299 ntBASIC17.9■□□□□ 0.46
CFAP54Q96N23 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 AC064836.3-201ENST00000607928 673 ntBASIC17.9■□□□□ 0.46
CFAP54Q96N23 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP54Q96N23 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP54Q96N23 AC024563.2-201ENST00000603282 481 ntBASIC17.9■□□□□ 0.46
CFAP54Q96N23 AL513190.1-201ENST00000621254 727 ntBASIC17.9■□□□□ 0.46
CFAP54Q96N23 AC107918.4-202ENST00000641623 219 ntBASIC17.9■□□□□ 0.46
CFAP54Q96N23 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.89■□□□□ 0.46
CFAP54Q96N23 INTS4P1-201ENST00000438455 1935 ntBASIC17.89■□□□□ 0.46
CFAP54Q96N23 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP54Q96N23 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CFAP54Q96N23 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.89■□□□□ 0.46
CFAP54Q96N23 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP54Q96N23 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 ELK2BP-201ENST00000415014 1224 ntBASIC17.89■□□□□ 0.45
CFAP54Q96N23 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP54Q96N23 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP54Q96N23 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP54Q96N23 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP54Q96N23 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms