Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 WWOX-216ENST00000569818 525 ntBASIC18.54■□□□□ 0.56
LRRC39Q96DD0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC39Q96DD0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 AC093010.1-201ENST00000473625 1624 ntBASIC18.53■□□□□ 0.56
LRRC39Q96DD0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 SLC25A1P2-201ENST00000430693 912 ntBASIC18.53■□□□□ 0.56
LRRC39Q96DD0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 AC142381.4-202ENST00000563973 229 ntBASIC18.53■□□□□ 0.56
LRRC39Q96DD0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 AL049637.2-201ENST00000641778 930 ntBASIC18.53■□□□□ 0.56
LRRC39Q96DD0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.53■□□□□ 0.56
LRRC39Q96DD0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 PRORSD1P-201ENST00000295112 541 ntBASIC18.52■□□□□ 0.56
LRRC39Q96DD0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 KRT18P23-201ENST00000435622 1283 ntBASIC18.52■□□□□ 0.56
LRRC39Q96DD0 AL355355.2-201ENST00000442321 338 ntBASIC18.52■□□□□ 0.56
LRRC39Q96DD0 TSPY17P-201ENST00000450329 467 ntBASIC18.52■□□□□ 0.56
LRRC39Q96DD0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 MIR3180-4-201ENST00000582223 153 ntBASIC18.52■□□□□ 0.56
LRRC39Q96DD0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 AL023803.3-201ENST00000615559 522 ntBASIC18.52■□□□□ 0.56
LRRC39Q96DD0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.52■□□□□ 0.56
LRRC39Q96DD0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LRRC39Q96DD0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
LRRC39Q96DD0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.52■□□□□ 0.55
LRRC39Q96DD0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
LRRC39Q96DD0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.52■□□□□ 0.55
LRRC39Q96DD0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC39Q96DD0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC39Q96DD0 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRRC39Q96DD0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
LRRC39Q96DD0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms