Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 KSR1P1-201ENST00000446298 240 ntBASIC17.66■□□□□ 0.42
VPS33AQ96AX1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 AC011298.2-201ENST00000617989 482 ntBASIC17.66■□□□□ 0.42
VPS33AQ96AX1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.66■□□□□ 0.42
VPS33AQ96AX1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 ESRRAP1-201ENST00000400596 1257 ntBASIC17.65■□□□□ 0.42
VPS33AQ96AX1 RN7SL471P-201ENST00000580476 299 ntBASIC17.65■□□□□ 0.42
VPS33AQ96AX1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 AL353708.3-201ENST00000610272 989 ntBASIC17.65■□□□□ 0.42
VPS33AQ96AX1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.65■□□□□ 0.42
VPS33AQ96AX1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.64■□□□□ 0.42
VPS33AQ96AX1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
VPS33AQ96AX1 AC139713.2-201ENST00000641328 2723 ntBASIC17.64■□□□□ 0.42
VPS33AQ96AX1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
VPS33AQ96AX1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 ID1-201ENST00000376105 1233 ntBASIC17.64■□□□□ 0.41
VPS33AQ96AX1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS33AQ96AX1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 CR392000.1-201ENST00000624770 1228 ntBASIC17.63■□□□□ 0.41
VPS33AQ96AX1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 AL109659.2-201ENST00000606809 1674 ntBASIC17.63■□□□□ 0.41
VPS33AQ96AX1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS33AQ96AX1 KRT16P1-201ENST00000399124 1418 ntBASIC17.63■□□□□ 0.41
VPS33AQ96AX1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS33AQ96AX1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms