Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP13Q92995 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP13Q92995 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.21■□□□□ 0.67
USP13Q92995 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.2■□□□□ 0.66
USP13Q92995 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.2■□□□□ 0.66
USP13Q92995 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP13Q92995 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP13Q92995 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.2■□□□□ 0.66
USP13Q92995 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 Z98044.1-201ENST00000632503 1764 ntBASIC19.2■□□□□ 0.66
USP13Q92995 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.2■□□□□ 0.66
USP13Q92995 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
USP13Q92995 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.2■□□□□ 0.66
USP13Q92995 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 DRAXINP1-201ENST00000437611 948 ntBASIC19.2■□□□□ 0.66
USP13Q92995 AP003733.1-201ENST00000491725 852 ntBASIC19.2■□□□□ 0.66
USP13Q92995 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.2■□□□□ 0.66
USP13Q92995 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.2■□□□□ 0.66
USP13Q92995 TPSP2-201ENST00000561760 610 ntBASIC19.2■□□□□ 0.66
USP13Q92995 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.2■□□□□ 0.66
USP13Q92995 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.2■□□□□ 0.66
USP13Q92995 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.2■□□□□ 0.66
USP13Q92995 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP13Q92995 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
USP13Q92995 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 AL357033.4-201ENST00000617703 1807 ntBASIC19.19■□□□□ 0.66
USP13Q92995 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.19■□□□□ 0.66
USP13Q92995 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.19■□□□□ 0.66
USP13Q92995 AL390719.2-201ENST00000606993 987 ntBASIC19.19■□□□□ 0.66
USP13Q92995 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
USP13Q92995 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 HEIH-201ENST00000623091 1652 ntBASIC19.19■□□□□ 0.66
USP13Q92995 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
USP13Q92995 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.19■□□□□ 0.66
USP13Q92995 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.19■□□□□ 0.66
USP13Q92995 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP13Q92995 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.19■□□□□ 0.66
USP13Q92995 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
USP13Q92995 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
USP13Q92995 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
USP13Q92995 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP13Q92995 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
USP13Q92995 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.18■□□□□ 0.66
USP13Q92995 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.18■□□□□ 0.66
USP13Q92995 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.18■□□□□ 0.66
USP13Q92995 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.18■□□□□ 0.66
USP13Q92995 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.18■□□□□ 0.66
USP13Q92995 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.18■□□□□ 0.66
USP13Q92995 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.18■□□□□ 0.66
USP13Q92995 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP13Q92995 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP13Q92995 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
USP13Q92995 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.17■□□□□ 0.66
USP13Q92995 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
USP13Q92995 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.17■□□□□ 0.66
USP13Q92995 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.17■□□□□ 0.66
USP13Q92995 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
USP13Q92995 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms