Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC008735.5-201ENST00000623544 497 ntBASIC23.39■■□□□ 1.33
SMARCC1Q92922 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC1Q92922 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.39■■□□□ 1.33
SMARCC1Q92922 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC1Q92922 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC1Q92922 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SMARCC1Q92922 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
SMARCC1Q92922 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC1Q92922 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC1Q92922 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC1Q92922 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 INIP-202ENST00000374236 874 ntTSL 2 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC1Q92922 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC1Q92922 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC1Q92922 AC083906.6-201ENST00000641366 219 ntBASIC23.38■■□□□ 1.33
SMARCC1Q92922 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC1Q92922 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SMARCC1Q92922 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.38■■□□□ 1.33
SMARCC1Q92922 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC1Q92922 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC1Q92922 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC1Q92922 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC1Q92922 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC1Q92922 CTNS-203ENST00000399306 803 ntTSL 3 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 GPX1P2-201ENST00000429271 606 ntBASIC23.37■■□□□ 1.33
SMARCC1Q92922 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 AC010327.4-202ENST00000591484 748 ntBASIC23.37■■□□□ 1.33
SMARCC1Q92922 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC1Q92922 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.37■■□□□ 1.33
SMARCC1Q92922 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SMARCC1Q92922 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.36■■□□□ 1.33
SMARCC1Q92922 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SMARCC1Q92922 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.36■■□□□ 1.33
SMARCC1Q92922 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SMARCC1Q92922 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.36■■□□□ 1.33
SMARCC1Q92922 DNAJB3-201ENST00000446806 729 ntBASIC23.36■■□□□ 1.33
SMARCC1Q92922 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SMARCC1Q92922 AC040169.1-201ENST00000565382 521 ntBASIC23.36■■□□□ 1.33
SMARCC1Q92922 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC23.36■■□□□ 1.33
SMARCC1Q92922 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SMARCC1Q92922 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SMARCC1Q92922 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.36■■□□□ 1.33
SMARCC1Q92922 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.35■■□□□ 1.33
SMARCC1Q92922 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.35■■□□□ 1.33
SMARCC1Q92922 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.35■■□□□ 1.33
SMARCC1Q92922 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.35■■□□□ 1.33
SMARCC1Q92922 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.35■■□□□ 1.33
SMARCC1Q92922 YBX2P1-201ENST00000394192 760 ntBASIC23.35■■□□□ 1.33
SMARCC1Q92922 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.35■■□□□ 1.33
SMARCC1Q92922 KRT18P65-201ENST00000439811 1286 ntBASIC23.35■■□□□ 1.33
SMARCC1Q92922 AC105339.3-201ENST00000560043 636 ntBASIC23.35■■□□□ 1.33
SMARCC1Q92922 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 MIR3687-2-201ENST00000577708 61 ntBASIC23.35■■□□□ 1.33
SMARCC1Q92922 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.35■■□□□ 1.33
SMARCC1Q92922 AP001160.2-201ENST00000596071 487 ntBASIC23.35■■□□□ 1.33
SMARCC1Q92922 MIR3687-1-201ENST00000614492 61 ntBASIC23.35■■□□□ 1.33
SMARCC1Q92922 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.35■■□□□ 1.33
SMARCC1Q92922 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms