Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 KRT8P45-201ENST00000414328 1447 ntBASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMIM11BQ8TCY0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 AC006116.8-202ENST00000587620 1550 ntBASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 TSPY23P-201ENST00000440136 739 ntBASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMIM11BQ8TCY0 UBALD1-205ENST00000590891 2641 ntBASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 HES2-206ENST00000489730 730 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms