Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL662844.1-201ENST00000546340 181 ntBASIC22.54■■□□□ 1.2
RTL9Q8NET4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.54■■□□□ 1.2
RTL9Q8NET4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.54■■□□□ 1.2
RTL9Q8NET4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.54■■□□□ 1.2
RTL9Q8NET4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RTL9Q8NET4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RTL9Q8NET4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.54■■□□□ 1.2
RTL9Q8NET4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTL9Q8NET4 ANO7L1-203ENST00000602586 1720 ntBASIC22.54■■□□□ 1.2
RTL9Q8NET4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.53■■□□□ 1.2
RTL9Q8NET4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RTL9Q8NET4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.53■■□□□ 1.2
RTL9Q8NET4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTL9Q8NET4 MINOS1P3-201ENST00000457048 203 ntBASIC22.53■■□□□ 1.2
RTL9Q8NET4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTL9Q8NET4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RTL9Q8NET4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTL9Q8NET4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RTL9Q8NET4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTL9Q8NET4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RTL9Q8NET4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTL9Q8NET4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.53■■□□□ 1.2
RTL9Q8NET4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTL9Q8NET4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTL9Q8NET4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.52■■□□□ 1.2
RTL9Q8NET4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.52■■□□□ 1.19
RTL9Q8NET4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
RTL9Q8NET4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RTL9Q8NET4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.51■■□□□ 1.19
RTL9Q8NET4 TP73-AS1-207ENST00000624167 988 ntBASIC22.51■■□□□ 1.19
RTL9Q8NET4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.51■■□□□ 1.19
RTL9Q8NET4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
RTL9Q8NET4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RTL9Q8NET4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.51■■□□□ 1.19
RTL9Q8NET4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.51■■□□□ 1.19
RTL9Q8NET4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTL9Q8NET4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 RNA5SP419-201ENST00000515908 135 ntBASIC22.5■■□□□ 1.19
RTL9Q8NET4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
RTL9Q8NET4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RTL9Q8NET4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms