Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 FAM197Y3-203ENST00000618346 717 ntBASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 MYLKP1-201ENST00000509077 1580 ntBASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
PCSK9Q8NBP7 AC104109.2-201ENST00000602919 1418 ntBASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 PCDHAC2-203ENST00000615316 3011 ntBASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 AC005104.2-201ENST00000427818 678 ntBASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 SART3-203ENST00000546611 1184 ntBASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 AL356309.3-201ENST00000624132 1934 ntBASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCSK9Q8NBP7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 RPS2P1-201ENST00000434010 821 ntBASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 AL591424.1-201ENST00000442569 1213 ntBASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 PGAM5P1-201ENST00000518923 814 ntBASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 OR7E14P-202ENST00000530490 1290 ntBASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCSK9Q8NBP7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCSK9Q8NBP7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 LINC00602-201ENST00000629776 2065 ntBASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 MED15P5-201ENST00000423150 992 ntBASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 KRT18P65-201ENST00000439811 1286 ntBASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCSK9Q8NBP7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms