Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 RHOQP3-201ENST00000437982 621 ntBASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 LINC01126-201ENST00000623515 1646 ntBASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
LTBP4Q8N2S1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 AC004817.3-201ENST00000602957 2129 ntBASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 BCAR1-209ENST00000546196 1340 ntBASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 Z98044.1-201ENST00000632503 1764 ntBASIC25.35■■□□□ 1.65
LTBP4Q8N2S1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 ARSEP1-201ENST00000420443 635 ntBASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 AC073592.5-201ENST00000624854 528 ntBASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 BASP1P1-201ENST00000430708 665 ntBASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 AL589182.2-201ENST00000619332 1049 ntBASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 AC004790.2-201ENST00000623588 572 ntBASIC25.34■■□□□ 1.65
LTBP4Q8N2S1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 AL121761.2-201ENST00000598007 1648 ntBASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 TEX21P-204ENST00000641479 1693 ntBASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 AC025048.6-201ENST00000634326 1161 ntBASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LTBP4Q8N2S1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 SPDYE22P-201ENST00000582158 798 ntBASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC25.32■■□□□ 1.64
LTBP4Q8N2S1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 DDT-204ENST00000404092 805 ntTSL 3 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 AL627223.1-201ENST00000416693 442 ntBASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 AC008687.5-201ENST00000593746 558 ntBASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC25.31■■□□□ 1.64
LTBP4Q8N2S1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LTBP4Q8N2S1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms