Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 MTCL1P1-201ENST00000446207 792 ntBASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 KRT18P58-201ENST00000527480 1120 ntBASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 MTDHP3-201ENST00000594186 672 ntBASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 MIR7706-201ENST00000613747 67 ntBASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 AC099343.3-201ENST00000605834 2503 ntBASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 SCARNA2-201ENST00000458748 420 ntBASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 AC106730.1-201ENST00000566722 1090 ntBASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 AL138831.2-201ENST00000606564 490 ntBASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.62■□□□□ 0.73
NPAS4Q8IUM7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 INTS4P1-201ENST00000438455 1935 ntBASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 KRT18P13-201ENST00000400056 1290 ntBASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 AC139887.3-201ENST00000568585 713 ntBASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 AC011467.2-201ENST00000598425 242 ntBASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 AP001269.4-201ENST00000609611 512 ntBASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 FAM215A-202ENST00000632077 792 ntBASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPAS4Q8IUM7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 AL049840.3-201ENST00000602669 611 ntBASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPAS4Q8IUM7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms